Summer School

Europe/Berlin
Mainz

Mainz

Johann-Joachim-Becher-Weg 5, Mainz 55128, Alte Mensa
Description

Mass Spectrometry meets Systems Medicine

22nd – 25th September 2025

📍 Mainz, Germany
The DIASyM Research Core is pleased to announce the second "Mass Spectrometry meets Systems Medicine" Summer School. This intensive four-day course targets students from M.Sc. to post-doctoral level with either biological, computational or medical sciences backgrounds, who wish to acquire skills in Mass Spectrometry, Multiomics Data Analysis and Computational Medicine. 
The Summer School will encompass advanced lectures and related workshops which are hosted by MSCoreSys (https://www.mscoresys.de/) principal investigators and PostDocs. In addition, there will be four keynote lectures highlighting important aspects in systems medicine, advances in mass spectrometric applications and (bio)informatics.

How to Apply:
To register, click the registration button at the top right of this page.
For any inquiries, please contact roodbarf@uni-mainz.de.
Registration Deadline: 30th August 2025

    • 11:30 12:30
      Registration/ Coffee and Snacks
    • 12:30 13:00
      Welcome and Introduction Lecture Hall

      Lecture Hall

    • 13:00 13:45
      Session I: Lecture 1 - Sample Preparation and MS Measurement: Basics of high-throughput proteomics - Sample preparation and LC-MS Analysis
      Convener: Prof. Stefan Tenzer (University Medical Center Mainz)
    • 13:45 14:45
      Keynote Speaker 1: Prof. Carsten Hopf, Mannheim University of Applied Sciences 1h Lecture hall

      Lecture hall

      Title: MALDI MS Imaging for spatial analysis of tissues and for single cell metabolomics

    • 14:45 15:00
      Coffee Break 15m
    • 15:00 16:30
      Parallel Workshops: Multiomics Data Analysis - supervised-AG Lu and AG ten Cate 1h 30m
    • 15:00 16:30
      Parallel Workshops:Mass Spectrometry - AG Ralser and AG Tenzer 1h 30m
    • 15:00 16:30
      Parallel workshops: Proteomics data analysis - AG Tenzer 1h 30m
    • 16:30 17:30
      Session II: Multiomics Data Analysis - Keynote Speaker Lecture hall

      Lecture hall

      Titel: Multiomics data integration

      Convener: Prof. Wolfgang Huber (EMBL Heidelberg)
    • 17:30 18:00
      Science Slam - Poster Presentation (2 min Flash Talk) 30m
    • 18:00 19:00
      Dinner 1h
    • 19:00 22:00
      Poster Session 3h
    • 09:00 10:30
      Career Roundtable 1: Prof. Ursula Klingmüller (DKFZ), Dr. Tanja Pies (University Medical Center Mainz) and Prof. Thierry Schmidlin (University Medical Center Mainz)
    • 10:30 10:45
      Coffee Break 15m
    • 10:45 11:30
      Lecture 2: Junyan Lu, University Hospital Heidelberg 45m

      Title: Integrative multi-omics analysis for precision oncology

    • 12:00 12:30
      Lunch 30m
    • 12:30 14:00
      Parallel Workshops: Repetition of Mass Spectrometry (AG Tenzer and AG Ralser) 1h 30m
    • 12:30 14:00
      Parallel Workshops: Repetition of Proteomics Data Analysis (AG Tenzer) 1h 30m
    • 12:30 14:00
      Parallel Workshops: Computation Medicine by AG Lu & AG tenCate 1h 30m
    • 14:00 14:45
      Session III: Computational Medicine- Lecture 3
      Convener: Dr Vincent Ten Cate (University Medical Center Mainz)
    • 14:45 15:00
      Coffee Break 15m
    • 15:00 16:00
      Keynote Speaker 3: Prof. Heiko Runz, Neuroscience at insitro Inc 1h

      Title: Leveraging muli-omics data in population biobanks to enhance drug discovery

    • 16:00 17:30
      Parallel Workshops: Multiomics Data Analysis (AG Wild & AG ten Cate) 1h 30m
    • 16:00 17:30
      Parallel Workshops: Ring Trials (AG Bindila) 1h 30m
    • 16:00 17:30
      Parallel Worshops: Metabolomics (AG Schmidlin) 1h 30m
    • 17:30 18:00
      Science Slam: Poster Presentation (2 min Flash Talk) 30m
    • 18:00 19:00
      Dinner 1h
    • 19:00 22:00
      Poster Session & Get together 3h
    • 09:00 09:45
      Session IV: Ring Trials

      Imaging in MS: Spatial Mass Spectrometry: Tissue Assessment in a Clinical Setting – A Ring Trial for Clinical Implementation

      Convener: Dr Oliver Klein (Charité - University Medicine Berlin)
    • 09:45 10:45
      Keynote Speaker 4 : Dr. Stefanie Hauck, Helmholtz Center Munich 1h

      Titel: Plasma proteomics - Insights from two ring trials, comparison with proximity extension assays (Olink) and the impact of blood matrices

    • 10:45 11:00
      Coffee Break 15m
    • 11:00 12:00
      Test Your Knowledge: Mass Spectrometry & Systems Medicine Quiz 1h
    • 12:00 13:00
      Lunch 1h
    • 13:00 14:30
      Parallel Workshops: Immunopeptidomics (AG Tenzer & AG Gomez) 1h 30m
    • 13:00 14:30
      Parallel Workshops: Repetition of Computation Medicine (AG Wild & AG tenCate) 1h 30m
    • 13:00 14:30
      Parallel Workshops: Repetition of Metabolomics (AG Schmidlin) 1h 30m
    • 14:30 18:00
      Social Activities 3h 30m

      Suggestions:
      a. Virtual Mainz (free Mainz app): VR/AR features with 3D reconstructions of important sights and buildings, virtual Gutenberg tour (hologram guided), insider tips with places, cafes, and bars, Mainz quiz, city map
      b. Schwarzlichtminigolf

    • 18:00 19:00
      Dinner 1h
    • 19:00 22:00
      Social Event 3h

      Suggestions:
      a. Pub quiz at Q-Kaff will be started from 6:00 p.m.
      b. Pub quiz at Nolan's Pub will be start from 8:00 p.m.
      c. Karaoke at the Irish Pub from 9:30 p.m.
      d. Wine bar

    • 09:00 10:30
      Career Roundtable 2: Dr. Stefanie Wernisch (Bruker), Dr Bernhard Müller(BioNTech), Dr. Stefanie Hauck (Helmholtz Center Munich)
    • 10:30 10:45
      Coffee Break 15m
    • 10:45 11:45
      Closing Lecture: Prof. Michael Roehrl -Department of Pathology- Harvard university 1h

      Titel: Bringing Proteomics to Patients

    • 11:45 12:00
      Wrap up and Closing 15m
    • 12:00 12:30
      Lunch 30m